fasta2nexus - convert FASTA multiple alignments to NEXUS format
fasta2nexus --in <input.fa> [options]
Converts a multiple alignment from padded FASTA format to NEXUS format
Requires the following non-core Perl libraries:
Path to input FASTA alignment (required)
Path to write output file to (default: STDOUT)
Line length to use for sequence wrapping
Write sequences as interleaved (default: false)
Specify sequence type (either 'dna' or 'protein'). If not given, will be guessed from the file contents.
Please submit bug reports to the issue tracker in the distribution repository.
Jeremy Volkening (jeremy.volkening@base2bio.com)
Copyright 2014-23 Jeremy Volkening
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>.